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Interfaces comparées

??? abstract "Patients" ## Patients

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=== "VariantGrid"

    === "Liste"

        [![](./images/variantgrid/patients/patients_list.jpg){ loading=lazy }](./images/variantgrid/patients/patients_list.jpg)

    === "Détails"

        [![](./images/variantgrid/patients/patients_details.jpg){ loading=lazy }](./images/variantgrid/patients/patients_details.jpg)

??? abstract "Projets" ## Projets

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=== "Alissa"

    [![](./images/alissa/analyses.jpg){ loading=lazy }](./images/alissa/analyses.jpg)

=== "ELLA"

    [![](./images/ella/project.jpg){ loading=lazy }](./images/ella/project.jpg)

=== "Scout"

    [![](./images/scout/institute_home.jpg){ loading=lazy }](./images/scout/institute_home.jpg)

=== "seqr"

    [![Projet Overview](./images/seqr-project.png){ loading=lazy }](./images/seqr-project.png)

=== "VarFish"
    [![Project Overview](./images/vf-project%20overview.jpg){ loading=lazy }](./images/vf-project%20overview.jpg)

??? abstract "Accueils d'interprétation" ## Accueils d'interprétation

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=== "Alissa"

    [![](./images/alissa/analysishome.jpg){ loading=lazy }](./images/alissa/analysishome.jpg)
    [![](./images/alissa/analysishome2.jpg){ loading=lazy }](./images/alissa/analysishome2.jpg)

=== "Scout"

    [![](./images/scout/case_home.jpg){ loading=lazy }](./images/scout/case_home.jpg)

=== "VarFish"

    [![Case Overview](./images/vf-case%20overview.jpg){ loading=lazy }](./images/vf-case%20overview.jpg)

??? question "Contrôles qualité" ## QC

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=== "VarFish"

    ![Case QC](./images/vf-case%20qc.jpg){ loading=lazy }

??? example "Tableaux d'interprétation" ## Tableaux d'interprétation

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=== "Alissa"

    === "Base"

        [![](./images/alissa/table.jpg){ loading=lazy }](./images/alissa/table.jpg)

    === "SNV"

        [![](./images/alissa/table2.jpg){ loading=lazy }](./images/alissa/table2.jpg)

    === "CNV"

        [![](./images/alissa/cnvtable.jpg){ loading=lazy }](./images/alissa/cnvtable.jpg)

=== "Cutevariant"

    [![](./images/cutevariant/fields_configured.jpg){ loading=lazy }](./images/cutevariant/fields_configured.jpg)

=== "ELLA"

    [![](./images/ella/table.jpg){ loading=lazy }](./images/ella/table.jpg)

=== "GLEAVES"

    [![](./images/gleaves/variant_table.png){ loading=lazy }](./images/gleaves/variant_table.png)

=== "Scout"

    [![](./images/scout/interptable.jpg){ loading=lazy }](./images/scout/interptable.jpg)

=== "SEAL"

    [![](./images/seal/seal_table.jpg){ loading=lazy }](./images/seal/seal_table.jpg)

=== "seqr"

    [![Variations](./images/seqr-table.jpeg){ loading=lazy }](./images/seqr-table.jpeg)

=== "VarFish"

    [![Filtres et tableau](./images/vf-table.jpg){ loading=lazy }](./images/vf-table.jpg)

=== "VariantGrid"

    [![](./images/variantgrid/analysis/table.jpg){ loading=lazy }](./images/variantgrid/analysis/table.jpg)

??? note "Menus de filtrage" ## Menus de filtrage

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=== "Alissa"

    === "Filtres rapides"

        [![](./images/alissa/quickfilters.jpg){ loading=lazy }](./images/alissa/quickfilters.jpg)

    === "Config nœud 1"

        [![](./images/alissa/formfilter.jpg){ loading=lazy }](./images/alissa/formfilter.jpg)

    === "Config nœud 2"

        [![](./images/alissa/formfilter2.jpg){ loading=lazy }](./images/alissa/formfilter2.jpg)

=== "Cutevariant"

    === "GUI"

        [![](./images/cutevariant/advanced_filter.jpg){ loading=lazy }](./images/cutevariant/advanced_filter.jpg)

    === "VQL"

        [![](./images/cutevariant/filter_in_vql.jpg){ loading=lazy }](./images/cutevariant/filter_in_vql.jpg)

    === "Animation"

        [![](./images/cutevariant/filter.gif){ loading=lazy }](./images/cutevariant/filter.gif)

=== "ELLA"

    [![](./images/ella/selec.jpg){ loading=lazy }](./images/ella/selec.jpg)

=== "GLEAVES"

    === "Formulaire"

        [![](./images/gleaves/filter_form.png){ loading=lazy }](./images/gleaves/filter_form.png)
    === "Filtres enregistrés"

        [![](./images/gleaves/registered_filters.png){ loading=lazy }](./images/gleaves/registered_filters.png)

=== "Scout"

    [![](./images/scout/interptable_filtersopen.jpg){ loading=lazy }](./images/scout/interptable_filtersopen.jpg)

=== "SEAL"

    [![](./images/seal/seal_filters.jpg){ loading=lazy }](./images/seal/seal_filters.jpg)

=== "seqr"

    [![Filtres](./images/seqr-filter.png){ loading=lazy }](./images/seqr-filter.png)

=== "VarFish"

    [![Filtres et tableau](./images/vf-table.jpg){ loading=lazy }](./images/vf-table.jpg)

=== "VariantGrid"

    === "Liste des nœuds"

        [![](./images/variantgrid/analysis/template_node_types.jpg){ loading=lazy }](./images/variantgrid/analysis/template_node_types.jpg)

    === "Sample"

        [![](./images/variantgrid/analysis/filter_sample.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_sample.jpg)

    === "Tags"

        [![](./images/variantgrid/analysis/filter_tags.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_tags.jpg)

    === "Impact"

        [![](./images/variantgrid/analysis/filter_effect.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_effect.jpg)

    === "Population"

        [![](./images/variantgrid/analysis/filter_pop.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_pop.jpg)

    === "Panel"

        [![](./images/variantgrid/analysis/filter_panel.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_panel.jpg)

    === "Intervals"

        [![](./images/variantgrid/analysis/filter_interval.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_interval.jpg)

    === "Phénotype"

        [![](./images/variantgrid/analysis/filter_pheno1.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_pheno1.jpg)
        [![](./images/variantgrid/analysis/filter_pheno2.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_pheno2.jpg)

??? note "Graphes de filtrage" ## Graphes de filtrage

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=== "Alissa"

    === "Graphe"

        [![](./images/alissa/graphe.jpg){ loading=lazy }](./images/alissa/graphe.jpg)

    === "Graphe 2"

        [![](./images/alissa/largegraph.jpg){ loading=lazy }](./images/alissa/largegraph.jpg)

    === "Use case"

        [![](./images/alissa/grapheexample.jpg){ loading=lazy }](./images/alissa/grapheexample.jpg)

=== "VariantGrid"

    === "Graphe"

        [![](./images/variantgrid/analysis/node_counts.jpg){ loading=lazy }](./images/variantgrid/analysis/node_counts.jpg)

    === "Recomptage"

        <iframe src="https://streamable.com/e/b1s2sp?autoplay=1&nocontrols=1" width="560" height="593" frameborder="0" allowfullscreen allow="autoplay"></iframe>

??? note "Features des tableaux" ## Features tableau

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=== "Alissa"

    === "Accordéon variation"

        [![](./images/alissa/varannotation.jpg){ loading=lazy }](./images/alissa/varannotation.jpg)

    === "Accordéon gène"

        [![](./images/alissa/collapsible.jpg){ loading=lazy }](./images/alissa/collapsible.jpg)

    === "Export"

        [![](./images/alissa/export.jpg){ loading=lazy }](./images/alissa/export.jpg)

    === "Labels"

        [![](./images/alissa/labelsconfig.jpg){ loading=lazy }](./images/alissa/labelsconfig.jpg)

=== "Cutevariant"

    === "Gène"

        [![](./images/cutevariant/gene_veiwer.jpg){ loading=lazy }](./images/cutevariant/gene_veiwer.jpg)

    === "Wordset"

        Panels de termes, pouvant être utilisés dans d'autres contextes que les gènes.
        [![](./images/cutevariant/add_wordset.jpg){ loading=lazy }](./images/cutevariant/add_wordset.jpg)
        [![](./images/cutevariant/filter_with_panels.jpg){ loading=lazy }](./images/cutevariant/filter_with_panels.jpg)

    === "Group by"

        Permet d'avoir facilement le nombre de variations pour chaque valeur de chaque colonne. Peut servir de condition de filtrage en un double clic.
        [![](./images/cutevariant/groupby.jpg){ loading=lazy }](./images/cutevariant/groupby.jpg)

    === "Sélection"

        Permet de facilement catégoriser un ensemble de variations répondant à certaines conditions. Même fonctionnement des tags pour le [prototype du Croisic](/functional_specification/front-end/pages/interpretation-table).
        [![](./images/cutevariant/selection.jpg){ loading=lazy }](./images/cutevariant/selection.jpg)
        [![](./images/cutevariant/selection_created.jpg){ loading=lazy }](./images/cutevariant/selection_created.jpg)

    === "Tooltip"

        Permet d'afficher en une infobulle toutes les informations de la variation (peu compatible pour cet exemple vu le nombre de champs retenus).
        [![](./images/cutevariant/tooltip.jpg){ loading=lazy }](./images/cutevariant/tooltip.jpg)

    === "Liens externes"

        Permet d'ajouter des liens vers des sites externes en réutilisant le contenu de colonnes avec une syntaxe jinja2.
        [![](./images/cutevariant/external_links.jpg){ loading=lazy }](./images/cutevariant/external_links.jpg)

    === "Tags"

        [![](./images/cutevariant/create_tag.jpg){ loading=lazy }](./images/cutevariant/create_tag.jpg)

=== "ELLA"

    === "Tooltip ClinVar"

        [![](./images/ella/clinvartooltip.jpg){ loading=lazy }](./images/ella/clinvartooltip.jpg)

    === "Fréquences"

        [![](./images/ella/freq.jpg){ loading=lazy }](./images/ella/freq.jpg)

    === "Recherche publications"

        [![](./images/ella/pubmenu.jpg){ loading=lazy }](./images/ella/pubmenu.jpg)

    === "Warnings"

        [![](./images/ella/warn.jpg){ loading=lazy }](./images/ella/warn.jpg)

=== "Scout"

    === "Tooltips"

        [![](./images/scout/gene_tooltip.jpg){ loading=lazy }](./images/scout/gene_tooltip.jpg)
        [![](./images/scout/multiple_freq_tooltips.jpg){ loading=lazy }](./images/scout/multiple_freq_tooltips.jpg)

    === "Hétérozygotie composite"

        [![](./images/scout/interptable_coupound_tooltip.jpg){ loading=lazy }](./images/scout/interptable_coupound_tooltip.jpg)

    === "SV overlap"

        [![](./images/scout/overlappingsv_tooltip.jpg){ loading=lazy }](./images/scout/overlappingsv_tooltip.jpg)

    === "Gestion dismiss"

        [![](./images/scout/interptable_dismiss_options.jpg){ loading=lazy }](./images/scout/interptable_dismiss_options.jpg)
        [![](./images/scout/dismiss_tooltip.jpg){ loading=lazy }](./images/scout/dismiss_tooltip.jpg)

=== "seqr"

    === "Infobulle qualité"

        [![Infobulle qualité](./images/seqr-quali.jpg){ loading=lazy }](./images/seqr-quali.jpg)

=== "VarFish"

    === "Accordéon"

        [![Accordéon](./images/vf-accordeon.jpg){ loading=lazy }](./images/vf-accordeon.jpg)

    === "Autres"

        [![Features](./images/vf-features.jpg){ loading=lazy }](./images/vf-features.jpg)

??? info "Vues détaillées des gènes" ## Vues détaillées de gènes

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=== "Alissa"

    [![](./images/alissa/collapsible.jpg){ loading=lazy }](./images/alissa/collapsible.jpg)

=== "Mobidetails"
    [![](./images/mobidetails/md_gene.jpg){ loading=lazy }](./images/mobidetails/md_gene.jpg)
    [![](./images/mobidetails/md_gene_variants.jpg){ loading=lazy }](./images/mobidetails/md_gene_variants.jpg)

=== "Scout"

    [![](./images/scout/gene_details.jpg){ loading=lazy }](./images/scout/gene_details.jpg)

=== "VariantGrid"

    === "Gene grid"

        [![](./images/variantgrid/genes/genegrid.jpg){ loading=lazy }](./images/variantgrid/genes/genegrid.jpg)

    === "Détails"

        [![](./images/variantgrid/genes/gene_detail.jpg){ loading=lazy }](./images/variantgrid/genes/gene_detail.jpg)

??? info "Vues détaillées des variations" ## Vues détaillées de variation

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=== "Alissa"

    [![](./images/alissa/varannotation.jpg){ loading=lazy }](./images/alissa/varannotation.jpg)

=== "Mobidetails"

    [![](./images/mobidetails/md_variant.jpg){ loading=lazy }](./images/mobidetails/md_variant.jpg)

=== "SEAL"

    === "Transcrits"

        [![](./images/seal/seal_vardet1.jpg){ loading=lazy }](./images/seal/seal_vardet1.jpg)

    === "Prédiction"

        [![](./images/seal/seal_vardet2.jpg){ loading=lazy }](./images/seal/seal_vardet2.jpg)

    === "Conservation"

        [![](./images/seal/seal_vardet3.jpg){ loading=lazy }](./images/seal/seal_vardet3.jpg)

    === "Fréquences"

        [![](./images/seal/seal_vardet4.jpg){ loading=lazy }](./images/seal/seal_vardet4.jpg)

    === "Epissage"

        [![](./images/seal/seal_vardet5.jpg){ loading=lazy }](./images/seal/seal_vardet5.jpg)

    === "Liens externes"

        [![](./images/seal/seal_vardet6.jpg){ loading=lazy }](./images/seal/seal_vardet6.jpg)

    === "Occurrences dans SEAL"

        [![](./images/seal/seal_vardet7.jpg){ loading=lazy }](./images/seal/seal_vardet7.jpg)

    === "Commentaires"

        [![](./images/seal/seal_vardet8.jpg){ loading=lazy }](./images/seal/seal_vardet8.jpg)

=== "Scout"

    [![](./images/scout/variant_details.jpg){ loading=lazy }](./images/scout/variant_details.jpg)

=== "VariantGrid"

    [![](./images/variantgrid/variants/variant_detail.jpg){ loading=lazy }](./images/variantgrid/variants/variant_detail.jpg)

??? success "Reviewing" ## Reviewing

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=== "Alissa"

    === "Classification de variation"

        [![](./images/alissa/reportingform.jpg){ loading=lazy }](./images/alissa/reportingform.jpg)

    === "Triage/Génération de rapport"

        [![](./images/alissa/variantreview.jpg){ loading=lazy }](./images/alissa/variantreview.jpg)

=== "ELLA"

    === "Menu de classification"

        [![](./images/ella/classificationmenu.jpg){ loading=lazy }](./images/ella/classificationmenu.jpg)

    === "Variation classée"

        [![](./images/ella/classified.jpg){ loading=lazy }](./images/ella/classified.jpg)

=== "Scout"

    === "Rapport d'interprétation"

        [![](./images/scout/internal_report.png){ loading=lazy }](./images/scout/internal_report.png)

    === "Compte-rendu d'analyse"

        [![](./images/scout/report_clinical.jpg){ loading=lazy }](./images/scout/report_clinical.jpg)

=== "SEAL"

    === "Classification"

        [![](./images/seal/seal_classification.jpg){ loading=lazy }](./images/seal/seal_classification.jpg)

    === "Export"

        [![](./images/seal/seal_export.jpg){ loading=lazy }](./images/seal/seal_export.jpg)

=== "seqr"
    === "Triage"

        [![Review](./images/seqr-review.png){ loading=lazy }](./images/seqr-review.png)

    === "ACMG"

        [![ACMG](./images/seqr-acmg.jpg){ loading=lazy }](./images/seqr-acmg.jpg)

=== "VarFish"

    [![Case Panier](./images/vf-panier.jpg){ loading=lazy }](./images/vf-panier.jpg)

=== "VariantGrid"

    === "Class. de var."

        [![](./images/variantgrid/classifications/classification_new.jpg){ loading=lazy }](./images/variantgrid/classifications/classification_new.jpg)

    === "Ajout critère ACMG"

        [![](./images/variantgrid/classifications/classification_ba.jpg){ loading=lazy }](./images/variantgrid/classifications/classification_ba.jpg)

Last update: October 4, 2023