Interfaces comparées
??? abstract "Patients" ## Patients
| === "VariantGrid"
=== "Liste"
[![](./images/variantgrid/patients/patients_list.jpg){ loading=lazy }](./images/variantgrid/patients/patients_list.jpg)
=== "Détails"
[![](./images/variantgrid/patients/patients_details.jpg){ loading=lazy }](./images/variantgrid/patients/patients_details.jpg)
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??? abstract "Projets" ## Projets
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[![](./images/alissa/analyses.jpg){ loading=lazy }](./images/alissa/analyses.jpg)
=== "ELLA"
[![](./images/ella/project.jpg){ loading=lazy }](./images/ella/project.jpg)
=== "Scout"
[![](./images/scout/institute_home.jpg){ loading=lazy }](./images/scout/institute_home.jpg)
=== "seqr"
[![Projet Overview](./images/seqr-project.png){ loading=lazy }](./images/seqr-project.png)
=== "VarFish"
[![Project Overview](./images/vf-project%20overview.jpg){ loading=lazy }](./images/vf-project%20overview.jpg)
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??? abstract "Accueils d'interprétation" ## Accueils d'interprétation
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12 | === "Alissa"
[![](./images/alissa/analysishome.jpg){ loading=lazy }](./images/alissa/analysishome.jpg)
[![](./images/alissa/analysishome2.jpg){ loading=lazy }](./images/alissa/analysishome2.jpg)
=== "Scout"
[![](./images/scout/case_home.jpg){ loading=lazy }](./images/scout/case_home.jpg)
=== "VarFish"
[![Case Overview](./images/vf-case%20overview.jpg){ loading=lazy }](./images/vf-case%20overview.jpg)
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??? question "Contrôles qualité" ## QC
| === "VarFish"
![Case QC](./images/vf-case%20qc.jpg){ loading=lazy }
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??? example "Tableaux d'interprétation" ## Tableaux d'interprétation
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=== "Base"
[![](./images/alissa/table.jpg){ loading=lazy }](./images/alissa/table.jpg)
=== "SNV"
[![](./images/alissa/table2.jpg){ loading=lazy }](./images/alissa/table2.jpg)
=== "CNV"
[![](./images/alissa/cnvtable.jpg){ loading=lazy }](./images/alissa/cnvtable.jpg)
=== "Cutevariant"
[![](./images/cutevariant/fields_configured.jpg){ loading=lazy }](./images/cutevariant/fields_configured.jpg)
=== "ELLA"
[![](./images/ella/table.jpg){ loading=lazy }](./images/ella/table.jpg)
=== "GLEAVES"
[![](./images/gleaves/variant_table.png){ loading=lazy }](./images/gleaves/variant_table.png)
=== "Scout"
[![](./images/scout/interptable.jpg){ loading=lazy }](./images/scout/interptable.jpg)
=== "SEAL"
[![](./images/seal/seal_table.jpg){ loading=lazy }](./images/seal/seal_table.jpg)
=== "seqr"
[![Variations](./images/seqr-table.jpeg){ loading=lazy }](./images/seqr-table.jpeg)
=== "VarFish"
[![Filtres et tableau](./images/vf-table.jpg){ loading=lazy }](./images/vf-table.jpg)
=== "VariantGrid"
[![](./images/variantgrid/analysis/table.jpg){ loading=lazy }](./images/variantgrid/analysis/table.jpg)
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??? note "Menus de filtrage" ## Menus de filtrage
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=== "Filtres rapides"
[![](./images/alissa/quickfilters.jpg){ loading=lazy }](./images/alissa/quickfilters.jpg)
=== "Config nœud 1"
[![](./images/alissa/formfilter.jpg){ loading=lazy }](./images/alissa/formfilter.jpg)
=== "Config nœud 2"
[![](./images/alissa/formfilter2.jpg){ loading=lazy }](./images/alissa/formfilter2.jpg)
=== "Cutevariant"
=== "GUI"
[![](./images/cutevariant/advanced_filter.jpg){ loading=lazy }](./images/cutevariant/advanced_filter.jpg)
=== "VQL"
[![](./images/cutevariant/filter_in_vql.jpg){ loading=lazy }](./images/cutevariant/filter_in_vql.jpg)
=== "Animation"
[![](./images/cutevariant/filter.gif){ loading=lazy }](./images/cutevariant/filter.gif)
=== "ELLA"
[![](./images/ella/selec.jpg){ loading=lazy }](./images/ella/selec.jpg)
=== "GLEAVES"
=== "Formulaire"
[![](./images/gleaves/filter_form.png){ loading=lazy }](./images/gleaves/filter_form.png)
=== "Filtres enregistrés"
[![](./images/gleaves/registered_filters.png){ loading=lazy }](./images/gleaves/registered_filters.png)
=== "Scout"
[![](./images/scout/interptable_filtersopen.jpg){ loading=lazy }](./images/scout/interptable_filtersopen.jpg)
=== "SEAL"
[![](./images/seal/seal_filters.jpg){ loading=lazy }](./images/seal/seal_filters.jpg)
=== "seqr"
[![Filtres](./images/seqr-filter.png){ loading=lazy }](./images/seqr-filter.png)
=== "VarFish"
[![Filtres et tableau](./images/vf-table.jpg){ loading=lazy }](./images/vf-table.jpg)
=== "VariantGrid"
=== "Liste des nœuds"
[![](./images/variantgrid/analysis/template_node_types.jpg){ loading=lazy }](./images/variantgrid/analysis/template_node_types.jpg)
=== "Sample"
[![](./images/variantgrid/analysis/filter_sample.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_sample.jpg)
=== "Tags"
[![](./images/variantgrid/analysis/filter_tags.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_tags.jpg)
=== "Impact"
[![](./images/variantgrid/analysis/filter_effect.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_effect.jpg)
=== "Population"
[![](./images/variantgrid/analysis/filter_pop.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_pop.jpg)
=== "Panel"
[![](./images/variantgrid/analysis/filter_panel.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_panel.jpg)
=== "Intervals"
[![](./images/variantgrid/analysis/filter_interval.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_interval.jpg)
=== "Phénotype"
[![](./images/variantgrid/analysis/filter_pheno1.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_pheno1.jpg)
[![](./images/variantgrid/analysis/filter_pheno2.jpg){ loading=lazy }](./images/variantgrid/analysis/filter_pheno2.jpg)
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??? note "Graphes de filtrage" ## Graphes de filtrage
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=== "Graphe"
[![](./images/alissa/graphe.jpg){ loading=lazy }](./images/alissa/graphe.jpg)
=== "Graphe 2"
[![](./images/alissa/largegraph.jpg){ loading=lazy }](./images/alissa/largegraph.jpg)
=== "Use case"
[![](./images/alissa/grapheexample.jpg){ loading=lazy }](./images/alissa/grapheexample.jpg)
=== "VariantGrid"
=== "Graphe"
[![](./images/variantgrid/analysis/node_counts.jpg){ loading=lazy }](./images/variantgrid/analysis/node_counts.jpg)
=== "Recomptage"
<iframe src="https://streamable.com/e/b1s2sp?autoplay=1&nocontrols=1" width="560" height="593" frameborder="0" allowfullscreen allow="autoplay"></iframe>
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??? note "Features des tableaux" ## Features tableau
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=== "Accordéon variation"
[![](./images/alissa/varannotation.jpg){ loading=lazy }](./images/alissa/varannotation.jpg)
=== "Accordéon gène"
[![](./images/alissa/collapsible.jpg){ loading=lazy }](./images/alissa/collapsible.jpg)
=== "Export"
[![](./images/alissa/export.jpg){ loading=lazy }](./images/alissa/export.jpg)
=== "Labels"
[![](./images/alissa/labelsconfig.jpg){ loading=lazy }](./images/alissa/labelsconfig.jpg)
=== "Cutevariant"
=== "Gène"
[![](./images/cutevariant/gene_veiwer.jpg){ loading=lazy }](./images/cutevariant/gene_veiwer.jpg)
=== "Wordset"
Panels de termes, pouvant être utilisés dans d'autres contextes que les gènes.
[![](./images/cutevariant/add_wordset.jpg){ loading=lazy }](./images/cutevariant/add_wordset.jpg)
[![](./images/cutevariant/filter_with_panels.jpg){ loading=lazy }](./images/cutevariant/filter_with_panels.jpg)
=== "Group by"
Permet d'avoir facilement le nombre de variations pour chaque valeur de chaque colonne. Peut servir de condition de filtrage en un double clic.
[![](./images/cutevariant/groupby.jpg){ loading=lazy }](./images/cutevariant/groupby.jpg)
=== "Sélection"
Permet de facilement catégoriser un ensemble de variations répondant à certaines conditions. Même fonctionnement des tags pour le [prototype du Croisic](/functional_specification/front-end/pages/interpretation-table).
[![](./images/cutevariant/selection.jpg){ loading=lazy }](./images/cutevariant/selection.jpg)
[![](./images/cutevariant/selection_created.jpg){ loading=lazy }](./images/cutevariant/selection_created.jpg)
=== "Tooltip"
Permet d'afficher en une infobulle toutes les informations de la variation (peu compatible pour cet exemple vu le nombre de champs retenus).
[![](./images/cutevariant/tooltip.jpg){ loading=lazy }](./images/cutevariant/tooltip.jpg)
=== "Liens externes"
Permet d'ajouter des liens vers des sites externes en réutilisant le contenu de colonnes avec une syntaxe jinja2.
[![](./images/cutevariant/external_links.jpg){ loading=lazy }](./images/cutevariant/external_links.jpg)
=== "Tags"
[![](./images/cutevariant/create_tag.jpg){ loading=lazy }](./images/cutevariant/create_tag.jpg)
=== "ELLA"
=== "Tooltip ClinVar"
[![](./images/ella/clinvartooltip.jpg){ loading=lazy }](./images/ella/clinvartooltip.jpg)
=== "Fréquences"
[![](./images/ella/freq.jpg){ loading=lazy }](./images/ella/freq.jpg)
=== "Recherche publications"
[![](./images/ella/pubmenu.jpg){ loading=lazy }](./images/ella/pubmenu.jpg)
=== "Warnings"
[![](./images/ella/warn.jpg){ loading=lazy }](./images/ella/warn.jpg)
=== "Scout"
=== "Tooltips"
[![](./images/scout/gene_tooltip.jpg){ loading=lazy }](./images/scout/gene_tooltip.jpg)
[![](./images/scout/multiple_freq_tooltips.jpg){ loading=lazy }](./images/scout/multiple_freq_tooltips.jpg)
=== "Hétérozygotie composite"
[![](./images/scout/interptable_coupound_tooltip.jpg){ loading=lazy }](./images/scout/interptable_coupound_tooltip.jpg)
=== "SV overlap"
[![](./images/scout/overlappingsv_tooltip.jpg){ loading=lazy }](./images/scout/overlappingsv_tooltip.jpg)
=== "Gestion dismiss"
[![](./images/scout/interptable_dismiss_options.jpg){ loading=lazy }](./images/scout/interptable_dismiss_options.jpg)
[![](./images/scout/dismiss_tooltip.jpg){ loading=lazy }](./images/scout/dismiss_tooltip.jpg)
=== "seqr"
=== "Infobulle qualité"
[![Infobulle qualité](./images/seqr-quali.jpg){ loading=lazy }](./images/seqr-quali.jpg)
=== "VarFish"
=== "Accordéon"
[![Accordéon](./images/vf-accordeon.jpg){ loading=lazy }](./images/vf-accordeon.jpg)
=== "Autres"
[![Features](./images/vf-features.jpg){ loading=lazy }](./images/vf-features.jpg)
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??? info "Vues détaillées des gènes" ## Vues détaillées de gènes
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[![](./images/alissa/collapsible.jpg){ loading=lazy }](./images/alissa/collapsible.jpg)
=== "Mobidetails"
[![](./images/mobidetails/md_gene.jpg){ loading=lazy }](./images/mobidetails/md_gene.jpg)
[![](./images/mobidetails/md_gene_variants.jpg){ loading=lazy }](./images/mobidetails/md_gene_variants.jpg)
=== "Scout"
[![](./images/scout/gene_details.jpg){ loading=lazy }](./images/scout/gene_details.jpg)
=== "VariantGrid"
=== "Gene grid"
[![](./images/variantgrid/genes/genegrid.jpg){ loading=lazy }](./images/variantgrid/genes/genegrid.jpg)
=== "Détails"
[![](./images/variantgrid/genes/gene_detail.jpg){ loading=lazy }](./images/variantgrid/genes/gene_detail.jpg)
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??? info "Vues détaillées des variations" ## Vues détaillées de variation
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[![](./images/alissa/varannotation.jpg){ loading=lazy }](./images/alissa/varannotation.jpg)
=== "Mobidetails"
[![](./images/mobidetails/md_variant.jpg){ loading=lazy }](./images/mobidetails/md_variant.jpg)
=== "SEAL"
=== "Transcrits"
[![](./images/seal/seal_vardet1.jpg){ loading=lazy }](./images/seal/seal_vardet1.jpg)
=== "Prédiction"
[![](./images/seal/seal_vardet2.jpg){ loading=lazy }](./images/seal/seal_vardet2.jpg)
=== "Conservation"
[![](./images/seal/seal_vardet3.jpg){ loading=lazy }](./images/seal/seal_vardet3.jpg)
=== "Fréquences"
[![](./images/seal/seal_vardet4.jpg){ loading=lazy }](./images/seal/seal_vardet4.jpg)
=== "Epissage"
[![](./images/seal/seal_vardet5.jpg){ loading=lazy }](./images/seal/seal_vardet5.jpg)
=== "Liens externes"
[![](./images/seal/seal_vardet6.jpg){ loading=lazy }](./images/seal/seal_vardet6.jpg)
=== "Occurrences dans SEAL"
[![](./images/seal/seal_vardet7.jpg){ loading=lazy }](./images/seal/seal_vardet7.jpg)
=== "Commentaires"
[![](./images/seal/seal_vardet8.jpg){ loading=lazy }](./images/seal/seal_vardet8.jpg)
=== "Scout"
[![](./images/scout/variant_details.jpg){ loading=lazy }](./images/scout/variant_details.jpg)
=== "VariantGrid"
[![](./images/variantgrid/variants/variant_detail.jpg){ loading=lazy }](./images/variantgrid/variants/variant_detail.jpg)
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??? success "Reviewing" ## Reviewing
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=== "Classification de variation"
[![](./images/alissa/reportingform.jpg){ loading=lazy }](./images/alissa/reportingform.jpg)
=== "Triage/Génération de rapport"
[![](./images/alissa/variantreview.jpg){ loading=lazy }](./images/alissa/variantreview.jpg)
=== "ELLA"
=== "Menu de classification"
[![](./images/ella/classificationmenu.jpg){ loading=lazy }](./images/ella/classificationmenu.jpg)
=== "Variation classée"
[![](./images/ella/classified.jpg){ loading=lazy }](./images/ella/classified.jpg)
=== "Scout"
=== "Rapport d'interprétation"
[![](./images/scout/internal_report.png){ loading=lazy }](./images/scout/internal_report.png)
=== "Compte-rendu d'analyse"
[![](./images/scout/report_clinical.jpg){ loading=lazy }](./images/scout/report_clinical.jpg)
=== "SEAL"
=== "Classification"
[![](./images/seal/seal_classification.jpg){ loading=lazy }](./images/seal/seal_classification.jpg)
=== "Export"
[![](./images/seal/seal_export.jpg){ loading=lazy }](./images/seal/seal_export.jpg)
=== "seqr"
=== "Triage"
[![Review](./images/seqr-review.png){ loading=lazy }](./images/seqr-review.png)
=== "ACMG"
[![ACMG](./images/seqr-acmg.jpg){ loading=lazy }](./images/seqr-acmg.jpg)
=== "VarFish"
[![Case Panier](./images/vf-panier.jpg){ loading=lazy }](./images/vf-panier.jpg)
=== "VariantGrid"
=== "Class. de var."
[![](./images/variantgrid/classifications/classification_new.jpg){ loading=lazy }](./images/variantgrid/classifications/classification_new.jpg)
=== "Ajout critère ACMG"
[![](./images/variantgrid/classifications/classification_ba.jpg){ loading=lazy }](./images/variantgrid/classifications/classification_ba.jpg)
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Last update:
October 4, 2023